The detailed information of tRNA gene sequence


Sequence ID>WENV170715010
Genome IDLNFM01124838
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 557
End posion on genome 650
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgtgcatgtt
tRNA gene sequence 
GGAGGGGCCAGGTTCCCGGTGGAGCCCTCGGTCTTCAAAACCGGTGGGGTGCGCCCAGCG
TGCCCGGTGGGTTCGACTCCCATGCCCCTCCGCCg
Downstream region at tRNA end position 
gcaaggtgcg
Secondary structure (Cloverleaf model)
>WENV170715010	SeC(p)	TCA
                   t      GCCg gcaaggtgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    C     T A C C C     A
      C C C        A      + | | | |     G
    G       T T G G       G T G G G     C
    G       | + | |                 T T
    T       A G C C
      G G          C     TGGGGTGCGCCCAGCGTGCCCG
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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