The detailed information of tRNA gene sequence


Sequence ID>WENV170715110
Genome IDLNFM01134345
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1156
End posion on genome 1080
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgtgtgttct
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAA
TCTTCCCAGGCCCACCA
Downstream region at tRNA end position 
ttcccgcctt
Secondary structure (Cloverleaf model)
>WENV170715110	Ile	GAT
                   t      ACCA ttcccgcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C T T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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