The detailed information of tRNA gene sequence


Sequence ID>WENV170715112
Genome IDLNFM01134378
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 986
End posion on genome 893
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgacgagac
tRNA gene sequence 
GGAGATGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTATAGGGTTGTAAAGC
CCTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gtttacatct
Secondary structure (Cloverleaf model)
>WENV170715112	Ser	GCT
                   c      GCCA gtttacatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTGTAAAGCCCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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