The detailed information of tRNA gene sequence


Sequence ID>WENV170715122
Genome IDLNFM01136625
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1890
End posion on genome 1803
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaggccctca
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCCCGCAAGGGCCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gcttgcatgc
Secondary structure (Cloverleaf model)
>WENV170715122	Ser	TGA
                   a      GCCA gcttgcatgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCCCGCAAGGGCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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