The detailed information of tRNA gene sequence


Sequence ID>WENV170715294
Genome IDLNQE01001339
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 1861
End posion on genome 1946
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccctttatct
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGCTCGGCACCAC
GGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
catttgcgtc
Secondary structure (Cloverleaf model)
>WENV170715294	Ser	CGA
                   t      GCtt catttgcgtc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCTCGGCACCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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