The detailed information of tRNA gene sequence


Sequence ID>WENV170715698
Genome IDLQAB01011345
Search identical group
Phylum/Class[LQAB] termite gut metagenome; bacterial endosymbionts found in Trichonympha flagellates filtered from termite gut
Species
Start position on genome 5152
End posion on genome 5228
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagacaacgc
tRNA gene sequence 
AGGGCAGTAGCTCTAACGGCTAGAGCGGCGGTCTCCAAAACCGCAAGTTGGGGGTTCGAA
TCCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
ttttgaggat
Secondary structure (Cloverleaf model)
>WENV170715698	Trp	CCA
                   c      GCCA ttttgaggat
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AAGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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