The detailed information of tRNA gene sequence


Sequence ID>WENV170715954
Genome IDLQYC01000011
Search identical group
Phylum/Class[LQYC] bioreactor metagenome; benzene-degrading methanogenic enrichment culture from a contaminated aquifer at an oil
Species
Start position on genome 3355
End posion on genome 3281
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcatttatgg
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGTCCATCCTATTGCGTTCGGGACGCAGTGACCTGAGTTCGA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
taatttagac
Secondary structure (Cloverleaf model)
>WENV170715954	Pro	CGG
                   g      Attt taatttagac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    T + G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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