The detailed information of tRNA gene sequence


Sequence ID>WENV170715994
Genome IDLQYC01000061
Search identical group
Phylum/Class[LQYC] bioreactor metagenome; benzene-degrading methanogenic enrichment culture from a contaminated aquifer at an oil
Species
Start position on genome 8499
End posion on genome 8424
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gatgcattgT
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGCTATGACGTCGCCTTCACACGGCGAAGATCTCGAGTTCGAA
TCTCGACGAGCCCATga
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV170715994	Val	CAC
                   T      ATga ttttttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C   A
                     C - G
                     G - C          T A
                    T     A G C T C     A
      C G A        G      | | | | |     G
    T       T C T G       T C G A G     C
    G         | | |                 T T
    G       T G A C
      C T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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