The detailed information of tRNA gene sequence


Sequence ID>WENV170716146
Genome IDLSPY01000001
Search identical group
Phylum/Class[LSPY] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 1
Species
Start position on genome 149725
End posion on genome 149818
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcctattaT
tRNA gene sequence 
GGAGGTTTGTCCGAGTGGTTGAAGGAGATACTCTTGAAAAGTATTAAATCTTTTAAGAAA
AGATTTCCAGGGTTCGAATCCCTGAGCCTCCGTat
Downstream region at tRNA end position 
tagaaaatgc
Secondary structure (Cloverleaf model)
>WENV170716146	Ser	TGA
                   T      GTat tagaaaatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       C A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAATCTTTTAAGAAAAGATTTC
                    A - T
                    T - A
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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