The detailed information of tRNA gene sequence


Sequence ID>WENV170716160
Genome IDLSPY01000077
Search identical group
Phylum/Class[LSPY] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 1
Species
Start position on genome 3989
End posion on genome 4064
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agagatatat
tRNA gene sequence 
CGGGGAATAGAGCAGTTGGTAGCTCATTGGGTTCATATCCCAAAGGTCGGCGGTTCGAGT
CCGTCTTCCCCAACAA
Downstream region at tRNA end position 
aaagacagaa
Secondary structure (Cloverleaf model)
>WENV170716160	Met	CAT
                   t      ACAA aaagacagaa
                     C   A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C G A G       G G C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          A     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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