The detailed information of tRNA gene sequence


Sequence ID>WENV170716167
Genome IDLSPY01000230
Search identical group
Phylum/Class[LSPY] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 1
Species
Start position on genome 2219
End posion on genome 2291
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccttgtttaT
tRNA gene sequence 
GGTTCGGTAGTTTAACGGTAAAATACCGGCTTGTCACGCCGGTGTTTGGAGTTCGACTCT
CCATCGGACCGTgt
Downstream region at tRNA end position 
ttatttaggt
Secondary structure (Cloverleaf model)
>WENV170716167	Asp	GTC
                   T      GTgt ttatttaggt
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C
                     G + T          T C
                    T     A C C T C     A
        A A        A      | | | | |     G
      C     T T T G       T G G A G     C
      G     | | | +                 T T
      G     A A A T
        T A        A     TGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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