The detailed information of tRNA gene sequence


Sequence ID>WENV170716186
Genome IDLSPZ01000004
Search identical group
Phylum/Class[LSPZ] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 2
Species
Start position on genome 2782
End posion on genome 2857
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatcatat
tRNA gene sequence 
AGGGGATTAGGCTCAGCGGCTAAACCGTCGGTCTCCAAAACCGATTTCACAGGTTCGAAT
CCTGTATCCCCTGCCA
Downstream region at tRNA end position 
atgtgcctct
Secondary structure (Cloverleaf model)
>WENV170716186	Trp	CCA
                   t      GCCA atgtgcctct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      G A C        A      | | | | |     G
    C       T C G G       A C A G G     C
    G       |   | |                 T T
    G       A A C C
      C T A        G     TTTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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