The detailed information of tRNA gene sequence


Sequence ID>WENV170716189
Genome IDLSPZ01000004
Search identical group
Phylum/Class[LSPZ] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 2
Species
Start position on genome 3228
End posion on genome 3303
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaccagatat
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCAATTGCCTTGCACGCAATAGGTCAGCGGTTCGAAC
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
ttagacaata
Secondary structure (Cloverleaf model)
>WENV170716189	Ala	TGC
                   t      ACCA ttagacaata
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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