The detailed information of tRNA gene sequence


Sequence ID>WENV170716195
Genome IDLSPZ01000004
Search identical group
Phylum/Class[LSPZ] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 2
Species
Start position on genome 18507
End posion on genome 18583
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccccatctat
tRNA gene sequence 
GCCCCAGTAGCTCAGTGGAAAGCAGCATCGGCCTTCTAAGCCGAGGGTCGCTGGTTCGAA
TCCAGCTTGGGGTACCA
Downstream region at tRNA end position 
tatgggccgt
Secondary structure (Cloverleaf model)
>WENV170716195	Arg	TCT
                   t      ACCA tatgggccgt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G + T          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G         | | |                 T T
    A       C A G C
      A A G        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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