The detailed information of tRNA gene sequence


Sequence ID>WENV170716314
Genome IDLSPZ01000833
Search identical group
Phylum/Class[LSPZ] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 2
Species
Start position on genome 1349
End posion on genome 1420
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttctttt
tRNA gene sequence 
AGCAGGGTAAAGCAGCGGCAGCTTGCGTGGCTCATAACCACGATGTCGGAGGTTCAAATC
CTCCCCCTGCTTtcg
Downstream region at tRNA end position 
ttttttacct
Secondary structure (Cloverleaf model)
>WENV170716314	Met	CAT
                   t      Ttcg ttttttacct
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
        G A        A      | | | | |     A
      C     C G A A       G G A G G     C
      G     | | | |                 T T
      G     G C T T
        C A        G     ATGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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