The detailed information of tRNA gene sequence


Sequence ID>WENV170716606
Genome IDLSQX01005169
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 38494
End posion on genome 38422
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttatgaggga
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCAAAT
CGCGGTGGCCCCAtcg
Downstream region at tRNA end position 
taccattttt
Secondary structure (Cloverleaf model)
>WENV170716606	Pro	TGG
                   a      Atcg taccattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G C G C     A
      C G A        A      | + | | |     A
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C          T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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