The detailed information of tRNA gene sequence


Sequence ID>WENV170716657
Genome IDLSQX01006773
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 66682
End posion on genome 66758
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taagtgtcgc
tRNA gene sequence 
GCAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTGCGCCA
Downstream region at tRNA end position 
tattacgaaa
Secondary structure (Cloverleaf model)
>WENV170716657	Asp	GTC
                   c      GCCA tattacgaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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