The detailed information of tRNA gene sequence


Sequence ID>WENV170716720
Genome IDLSQX01009426
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 119
End posion on genome 45
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtggcatat
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCACCCTTTCACGGTGGTATCAGGGGTTCGAGTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
tttttttcac
Secondary structure (Cloverleaf model)
>WENV170716720	Glu	TTC
                   t      ACCA tttttttcac
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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