The detailed information of tRNA gene sequence


Sequence ID>WENV170717001
Genome IDLSQX01020126
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9100
End posion on genome 9010
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attattatac
tRNA gene sequence 
GGAGAGATGGTCGAGCCGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGGGTTCACGCTC
ACCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
attttataga
Secondary structure (Cloverleaf model)
>WENV170717001	Ser	TGA
                   c      GCCA attttataga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
    C C G A        G      | | | | |     G
  G         G C T G       C T G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTGGGTTCACGCTCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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