The detailed information of tRNA gene sequence


Sequence ID>WENV170717003
Genome IDLSQX01020135
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 743
End posion on genome 669
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGTGCGGTAGTTCAGTTGGTTAGAATATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCACCGCtt
Downstream region at tRNA end position 
tgtattctgt
Secondary structure (Cloverleaf model)
>WENV170717003	Asp	GTC
                   n      GCtt tgtattctgt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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