The detailed information of tRNA gene sequence


Sequence ID>WENV170717008
Genome IDLSQX01020234
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 370
End posion on genome 293
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cataatgatt
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTTAGCGCGCTTGGTTCGGGACCAAGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tctaactcaa
Secondary structure (Cloverleaf model)
>WENV170717008	Pro	CGG
                   t      ACCA tctaactcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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