The detailed information of tRNA gene sequence


Sequence ID>WENV170717020
Genome IDLSQX01020605
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3334
End posion on genome 3410
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggtacgaac
tRNA gene sequence 
CGGGATATGGCGCAGCTTGGTAGCGCGCCTCGTTCGGGACGAGGAGGTCGCAGGTTCAAA
TCCTGTTATCCCGACCA
Downstream region at tRNA end position 
cagagacacc
Secondary structure (Cloverleaf model)
>WENV170717020	Pro	CGG
                   c      ACCA cagagacacc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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