The detailed information of tRNA gene sequence


Sequence ID>WENV170717025
Genome IDLSQX01021153
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 983
End posion on genome 908
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taaggaaaat
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGATC
CCGTTCATCTCCACCA
Downstream region at tRNA end position 
agcacttatc
Secondary structure (Cloverleaf model)
>WENV170717025	Ala	TGC
                   t      ACCA agcacttatc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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