The detailed information of tRNA gene sequence


Sequence ID>WENV170717124
Genome IDLSQX01025188
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12214
End posion on genome 12144
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gatataatat
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACACTAGCCTTCCAAGCTAGATACGTGGGTTCGATTCC
CATCACCCGCTtga
Downstream region at tRNA end position 
tatgtggaaa
Secondary structure (Cloverleaf model)
>WENV170717124	Gly	TCC
                   t      Ttga tatgtggaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     ATAC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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