The detailed information of tRNA gene sequence


Sequence ID>WENV170717170
Genome IDLSQX01026917
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18114
End posion on genome 18200
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacgctctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAAAGCTTGTGGGGCTTAGCCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGTCA
Downstream region at tRNA end position 
tgttttctta
Secondary structure (Cloverleaf model)
>WENV170717170	Ser	GGA
                   T      GTCA tgttttctta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCTTAGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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