The detailed information of tRNA gene sequence


Sequence ID>WENV170717173
Genome IDLSQX01027017
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 841
End posion on genome 767
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acatccgacT
tRNA gene sequence 
GGGGATGTAGCTTAGTTGGGAGAGCGCCGCCTTTGCAAGGCGGAGGTCGTGGGTTCGAAT
CCCATCATCTCCATat
Downstream region at tRNA end position 
gctgggcttc
Secondary structure (Cloverleaf model)
>WENV170717173	Ala	TGC
                   T      ATat gctgggcttc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       T T C G       G T G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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