The detailed information of tRNA gene sequence


Sequence ID>WENV170717177
Genome IDLSQX01027200
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2782
End posion on genome 2856
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttaatttcat
tRNA gene sequence 
GGGCTCGTGGTCTAGACGGTTATGACGTCGCCTTCACACGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGGGCCCACtc
Downstream region at tRNA end position 
ttctttatca
Secondary structure (Cloverleaf model)
>WENV170717177	Val	CAC
                   t      ACtc ttctttatca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      A G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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