The detailed information of tRNA gene sequence


Sequence ID>WENV170717226
Genome IDLSQX01028459
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1078
End posion on genome 1002
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atctccacca
tRNA gene sequence 
AGGCTCATAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGGGCCTACCA
Downstream region at tRNA end position 
gtgcaatctt
Secondary structure (Cloverleaf model)
>WENV170717226	Ile	GAT
                   a      ACCA gtgcaatctt
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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