The detailed information of tRNA gene sequence


Sequence ID>WENV170717240
Genome IDLSQX01028891
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 40160
End posion on genome 40087
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aggtcaattt
tRNA gene sequence 
GCCACCTTAGCTCAGCTGGCCAGAGCACGTGACTTGTAATCTCGGGGTCGTCAGTTCGAA
TCTGACAGGTGGCTatg
Downstream region at tRNA end position 
ctacccgaaa
Secondary structure (Cloverleaf model)
>WENV170717240	Thr	TGT
                   t      Tatg ctacccgaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C A G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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