The detailed information of tRNA gene sequence


Sequence ID>WENV170717305
Genome IDLSQX01030884
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4716
End posion on genome 4639
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaagtttagt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGCCAGCGCACCTGAATGGGGTTCAGGGGGTCGGAGGTTCGA
GTCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
gagctcatta
Secondary structure (Cloverleaf model)
>WENV170717305	Pro	GGG
                   t      ACCA gagctcatta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
    T T G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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