The detailed information of tRNA gene sequence


Sequence ID>WENV170717344
Genome IDLSQX01032445
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1241
End posion on genome 1155
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
attctcatat
tRNA gene sequence 
GCAGGGGTGGTCGAGCGGTCAAAGGCGCTAGGTTGAGGGCCTAGTGGGGGAGTCCCTTCG
CGGGTTCGAATCCCGTCCCCTGCACTA
Downstream region at tRNA end position 
ttcaaatact
Secondary structure (Cloverleaf model)
>WENV170717344	Leu	GAG
                   t      ACTA ttcaaatact
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       G C T G       G C G G G     C
    G         | + |                 T T
    T       A G G C
      C A A        G     TGGGGGAGTCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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