The detailed information of tRNA gene sequence


Sequence ID>WENV170717350
Genome IDLSQX01032654
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1660
End posion on genome 1733
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taaccatcac
tRNA gene sequence 
GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGGGTCAGGGGTTCGAGT
CCCCTTAGCTCCACtc
Downstream region at tRNA end position 
gtgaaaagag
Secondary structure (Cloverleaf model)
>WENV170717350	Ala	GGC
                   c      ACtc gtgaaaagag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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