The detailed information of tRNA gene sequence


Sequence ID>WENV170717490
Genome IDLSQX01036940
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5347
End posion on genome 5423
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtataattt
tRNA gene sequence 
GGGCTTATAGCTCAGCCGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTAAGCCCACCA
Downstream region at tRNA end position 
caatatttca
Secondary structure (Cloverleaf model)
>WENV170717490	Ile	GAT
                   t      ACCA caatatttca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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