The detailed information of tRNA gene sequence


Sequence ID>WENV170717496
Genome IDLSQX01037280
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1825
End posion on genome 1750
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctgattattT
tRNA gene sequence 
GGGGTGGTAGCTCAACTGGTTAGAGCTTTGCACTGTCACTGCAAAGGTTGCGGGTTCGAG
TCCCGTCCACCCCGTtt
Downstream region at tRNA end position 
ttactattcc
Secondary structure (Cloverleaf model)
>WENV170717496	Asp	GTC
                   T      GTtt ttactattcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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