The detailed information of tRNA gene sequence


Sequence ID>WENV170717509
Genome IDLSQX01038179
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11254
End posion on genome 11327
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccgacttcct
tRNA gene sequence 
GGGTCTGTGGCGCAGCTGGTAGCGCACCTGCATGGCATGCAGGGGGTCAGGGGTTCGAGT
CCCCTCAGATCCACtc
Downstream region at tRNA end position 
acgttgtttg
Secondary structure (Cloverleaf model)
>WENV170717509	Ala	GGC
                   t      ACtc acgttgtttg
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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