The detailed information of tRNA gene sequence


Sequence ID>WENV170717517
Genome IDLSQX01038477
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1720
End posion on genome 1646
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtttactgg
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTAtat
Downstream region at tRNA end position 
tcttttatcg
Secondary structure (Cloverleaf model)
>WENV170717517	Met	CAT
                   g      Atat tcttttatcg
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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