The detailed information of tRNA gene sequence


Sequence ID>WENV170717519
Genome IDLSQX01038696
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8953
End posion on genome 9026
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attcgccatc
tRNA gene sequence 
GGGCGGATAGCTCAGCTGGTTAGAGCGCATCTCTTACACAGATGAGGTCGCAGGTTCGAG
TCCTGTTCCGCCCAttt
Downstream region at tRNA end position 
tccttttaag
Secondary structure (Cloverleaf model)
>WENV170717519	Val	TAC
                   c      Attt tccttttaag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    T - A
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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