The detailed information of tRNA gene sequence


Sequence ID>WENV170717686
Genome IDLSQX01045871
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1317
End posion on genome 1242
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cataaggcat
tRNA gene sequence 
CGGGGTGTGGCTCAGGTGGTAGAGCGCTTGGTTCGGGACCAAGAGGCCGCAGGTTCAAGT
CCTGTCACTCCGACCA
Downstream region at tRNA end position 
gtttgaagac
Secondary structure (Cloverleaf model)
>WENV170717686	Pro	CGG
                   t      ACCA gtttgaagac
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      G G A        G      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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