The detailed information of tRNA gene sequence


Sequence ID>WENV170717724
Genome IDLSQX01047283
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2497
End posion on genome 2422
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAGT
CCATCTCCCGCAACCA
Downstream region at tRNA end position 
atattaaagt
Secondary structure (Cloverleaf model)
>WENV170717724	Met	CAT
                   t      ACCA atattaaagt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C T A C C     A
      T G A        G      |   | | |     A
    T       C G A G       G T T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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