The detailed information of tRNA gene sequence


Sequence ID>WENV170717847
Genome IDLSQX01052034
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 691
End posion on genome 615
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcatagggt
tRNA gene sequence 
GGAGCTGTAGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
tcatgccgag
Secondary structure (Cloverleaf model)
>WENV170717847	Asp	GTC
                   t      GCCA tcatgccgag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      A G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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