The detailed information of tRNA gene sequence


Sequence ID>WENV170717864
Genome IDLSQX01052584
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11162
End posion on genome 11237
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gttgcagcaa
tRNA gene sequence 
GGGGCTATGGCGCAGTTGGTAGCGCGTCTCGTTCGCAATGAGAAGGTCAGGGGTTCGAAT
CCCCTTAGCTCCACCC
Downstream region at tRNA end position 
cacgcacaag
Secondary structure (Cloverleaf model)
>WENV170717864	Ala	CGC
                   a      ACCC cacgcacaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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