The detailed information of tRNA gene sequence


Sequence ID>WENV170717993
Genome IDLSQX01057638
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3918
End posion on genome 3845
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtcatctgat
tRNA gene sequence 
GGGCTGGTAGATCAGCTGGAAGATCGCTTGCTTTGCAAGCAAGAAGTCGCGCGTTCAAAT
CGCGCCCAGTCCACtt
Downstream region at tRNA end position 
cctgcttatt
Secondary structure (Cloverleaf model)
>WENV170717993	Ala	TGC
                   t      ACtt cctgcttatt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C G C G C     A
      C G A        A      | | | | |     A
    T       C T A G       G C G C G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AAGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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