The detailed information of tRNA gene sequence


Sequence ID>WENV170718052
Genome IDLSQX01059363
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6375
End posion on genome 6300
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gagggaatac
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACATTGGCATTGTAGAGGTCGCGAGTTCGAAT
CTCGCCCTGTCCACCA
Downstream region at tRNA end position 
ttcacacttt
Secondary structure (Cloverleaf model)
>WENV170718052	Ala	GGC
                   c      ACCA ttcacacttt
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T A G       G C G A G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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