The detailed information of tRNA gene sequence


Sequence ID>WENV170718062
Genome IDLSQX01059905
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1011
End posion on genome 1086
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcgaagccct
tRNA gene sequence 
GGTCTGTTGGCTCAGTTGGTAGAGCACATCGTTCACATCGATGGGGTCACTGGTTCGAGT
CCAGTACAGACCACCA
Downstream region at tRNA end position 
caaaacctca
Secondary structure (Cloverleaf model)
>WENV170718062	Val	CAC
                   t      ACCA caaaacctca
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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