The detailed information of tRNA gene sequence


Sequence ID>WENV170718220
Genome IDLSQX01066393
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 39
End posion on genome 115
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
caaaaaaatg
tRNA gene sequence 
GTGATTGTAGCTCAGTTGGTTAGAGCGTCGGATTGTGGTTCCGAAGGTCGCCGGTTCGAG
CCCGGTCTTTCACCCCA
Downstream region at tRNA end position 
aagcagggct
Secondary structure (Cloverleaf model)
>WENV170718220	His	GTG
                   g      CCCA aagcagggct
                     G - C
                     T - A
                     G - C
                     A - T
                     T   T
                     T   T
                     G - C          C G
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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