The detailed information of tRNA gene sequence


Sequence ID>WENV170718401
Genome IDLSQX01074337
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4083
End posion on genome 4009
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aatgaattgc
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGACCATCCTATTACGTTCGGGACGTAGTGACCTGAGTTCGA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
ttccattctc
Secondary structure (Cloverleaf model)
>WENV170718401	Pro	CGG
                   c      Attt ttccattctc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        A     TGAC
                    T + G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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