The detailed information of tRNA gene sequence


Sequence ID>WENV170718410
Genome IDLSQX01074624
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 314
End posion on genome 387
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctcgaagatc
tRNA gene sequence 
GGGCTTATAGCTCAGCTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTAAGTCCACtt
Downstream region at tRNA end position 
caatgcaccc
Secondary structure (Cloverleaf model)
>WENV170718410	Ala	TGC
                   c      ACtt caatgcaccc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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