The detailed information of tRNA gene sequence


Sequence ID>WENV170718568
Genome IDLSQX01081856
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 103945
End posion on genome 103870
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatctttcac
tRNA gene sequence 
GGCCAGGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGCAGTTCGATT
CTGCCCCAGGCCACCA
Downstream region at tRNA end position 
atattcaaac
Secondary structure (Cloverleaf model)
>WENV170718568	Phe	GAA
                   c      ACCA atattcaaac
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     G - C
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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