The detailed information of tRNA gene sequence


Sequence ID>WENV170718617
Genome IDLSQX01083618
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1528
End posion on genome 1457
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattatttaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGAAGCTCGTCAGGCTCATAACCTGGAGGTCGTCGGTTCGAATC
CGACCCCCGCAAttc
Downstream region at tRNA end position 
atcaccttgt
Secondary structure (Cloverleaf model)
>WENV170718617	Met	CAT
                   a      Attc atcaccttgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     C G A G       G T C G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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