The detailed information of tRNA gene sequence


Sequence ID>WENV170718722
Genome IDLSQX01088206
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5563
End posion on genome 5649
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttcaataT
tRNA gene sequence 
GCTGAGGTAGCCAAGCGGACCACGGCGCCGGTCTTGAAAACCGGTAGCGCTACGCGCTAC
GGGAGTTCGAATCTCTCCCTCAGCGTaa
Downstream region at tRNA end position 
ctttcttttt
Secondary structure (Cloverleaf model)
>WENV170718722	Ser	TGA
                   T      GTaa ctttcttttt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    G       A C C G       G G G A G     C
    G         | | |                 T T
    A       C G G C
      C C A        G     TAGCGCTACGCGCTAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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